Keep some folders, but dump the files

[James]

Yes, to copy the folder but not the contents you would need to add a wild card to the path. If you don't want invisible files (.DS_Store, .Trash etc…) to be copied too then you would also add the dot wild card as well.

You want your paths to be like this:

Visible files: Users/*/Movies/*
Invisible files: Users/*/Movies/.*